rfhg_236702.1

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Basic information about the TSS


TSS ID:rfhg_236702.1
Species:human
Chr:chrX
Start:66638634
End:66638635
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:pELS,CTCF-bound (EH38D4287517,EH38E2756780)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:LF381583:-97
MA617160:-97
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • LF381584:-142
  • MA617161:-142
  • LF381585:-344
  • MA617162:-344
  • BC034919:-406
  • AK296264:-409
  • LF381586:-409
  • MA617163:-409
  • AK299018:-415
  • ENST00000374719.8:-443
  • NM_001324206.2:-443
  • NM_021783.5:-443
  • NM_001324204.2:-443
  • NM_001324205.2:-443
  • NM_001324199.2:-443
  • NR_136727.2:-443
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:444
Nearest PromoterID:NM_001324204
Entrez ID:60401
Nearest Unigene:Hs.302017
Nearest Refseq:NM_021783
Nearest Ensembl:ENSG00000131080
Gene Name:
Gene Alias:EDA-A2R|EDAA2R|TNFRSF27|XEDAR
Gene Type:protein-coding
CpG%:0.000000
GC%:0.500000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):




















Property "Nearest transcripts" (as page type) with input value "LF381584:-142 MA617161:-142 LF381585:-344 MA617162:-344 BC034919:-406 AK296264:-409 LF381586:-409 MA617163:-409 AK299018:-415 ENST00000374719.8:-443 NM_001324206.2:-443 NM_021783.5:-443 NM_001324204.2:-443 NM_001324205.2:-443 NM_001324199.2:-443 NR_136727.2:-443" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.