rfhg_23740.1

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Basic information about the TSS


TSS ID:rfhg_23740.1
Species:human
Chr:chr2
Start:20447266
End:20447286
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:pELS,CTCF-bound (EH38D3096084,EH38E1978568)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:LF213782:-168
MA449359:-168
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • AB385057:179
  • GQ129351:179
  • EU832788:179
  • CR542272:180
  • BT019546:180
  • BT019547:180
  • AF498971:180
  • X06820:180
  • ENST00000272233.6:-192
  • NM_004040.4:-192
  • AK297495:-192
  • AK309991:-192
  • BC066954:-192
  • AK124398:-192
  • LF209471:-193
  • MA445048:-193
  • AK312487:-194
  • AK310813:-195
  • M12174:263
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:202
Nearest PromoterID:NM_004040
Entrez ID:388
Nearest Unigene:Hs.502876
Nearest Refseq:NM_004040
Nearest Ensembl:ENSG00000143878
Gene Name:
Gene Alias:ARH6|ARHB|MST081|MSTP081|RHOH6
Gene Type:protein-coding
CpG%:0.150000
GC%:0.809524
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):




















Property "Nearest transcripts" (as page type) with input value "AB385057:179 GQ129351:179 EU832788:179 CR542272:180 BT019546:180 BT019547:180 AF498971:180 X06820:180 ENST00000272233.6:-192 NM_004040.4:-192 AK297495:-192 AK309991:-192 BC066954:-192 AK124398:-192 LF209471:-193 MA445048:-193 AK312487:-194 AK310813:-195 M12174:263" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.