rfhg_237768.1

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Basic information about the TSS


TSS ID:rfhg_237768.1
TSS ID(Version3):hg_199976.1
Species:human
Chr:chrX
Start:102155929
End:102156002
Strand:-
Source datasetsFANTOM5|EPD|RAMPAGE|PRJNA401781|PRJNA548673
ProtocolCAGE|TSS_database|RAMPAGE|oligo_capping|ReCappable-seq
TSS cluster detected*7

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D4298625,EH38E2761983)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000333643.4:0
AY833564:0
BC042818:0
BC092450:0
GeneID:340542
HGNC/MGI_ID:HGNC:27990
UniProt_ID:Q5H9J7
Nearer transcript ids and distances:
  • BC106955:-12
  • ENST00000543160.5:139
  • ENST00000484837.1:139
  • NM_001159560.2:139
view more...
Gene_name:brain expressed X-linked 5
Gene_symbol:BEX5
Gene_synonyms:
Gene_source:HGNC:27990



TATA-Box annotation


Distance to TSS:12
Nearest PromoterID:NM_001012978
Entrez ID:340542
Nearest Unigene:Hs.47209
Nearest Refseq:NM_001012978
Nearest Ensembl:ENSG00000184515
Gene Name:brain expressed X-linked 5
Gene Alias:NGFRAP1L1
Gene Type:protein-coding
CpG%:0.068493
GC%:0.581081
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.