rfhg_237799.1

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Basic information about the TSS


TSS ID:rfhg_237799.1
TSS ID(Version3):hg_197003.1
Species:human
Chr:chrX
Start:102769148
End:102769261
Strand:+
Source datasetsFANTOM5|DRA000914|PRJNA401781|PRJNA615891|PRJNA4843412
|DRA013844|PRJDB5282
ProtocolCAGE|SLIC_CAGE|TIF-seq2|NETCAGE|C1CAGE
TSS cluster detected*8

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D4298774,EH38E2762051)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000661018.1:0
ENST00000664568.1:0
ENST00000431616.5:0
ENST00000668536.1:0
ENST00000440496.5:0
ENST00000420471.5:0
ENST00000663114.1:0
ENST00000658813.1:0
ENST00000435966.1:0
BC040959:0
GeneID:100287765
HGNC/MGI_ID:HGNC:44263
UniProt_ID:
Nearer transcript ids and distances:
  • ENST00000656628.1:40
Gene_name:long intergenic non-protein coding RNA 630
Gene_symbol:LINC00630
Gene_synonyms:
Gene_source:HGNC:44263



TATA-Box annotation


Distance to TSS:51
Nearest PromoterID:NR_146592
Entrez ID:100287765
Nearest Unigene:Hs.556850
Nearest Refseq:NR_038988
Nearest Ensembl:
Gene Name:long intergenic non-protein coding RNA 630
Gene Alias:-
Gene Type:ncRNA
CpG%:0.035398
GC%:0.543860
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.