rfhg_240391.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_240391.1
Species:human
Chr:chrX
Start:154019945
End:154019953
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D4322224,EH38E2774055)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:LF160526:0
LP951968:0
LQ072827:0
LQ724706:0
LY480841:0
LY495704:0
LY496292:0
LY497438:0
LY499095:0
LY499849:0
LZ238468:0
MA349115:0
MA646328:0
MA734212:0
MS816884:0
MS833927:0
MS868869:0
MS880410:0
MS884625:0
MS884968:0
MS994300:0
MA803381:0
MA805903:0
LY616232:0
MB406750:0
MB407144:0
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENST00000390190.4:-36
  • NR_031757.1:-36
  • LG052088:-36
  • LY480963:-36
  • LY495854:-36
  • LY496504:-36
  • LY497447:-36
  • LY499371:-36
  • LY500047:-36
  • LZ238725:-36
  • MA349127:-36
  • MS869019:-36
  • MS880686:-36
  • MS884634:-36
  • MS885166:-36
  • MS994512:-36
  • MA806180:-36
  • LY616489:-36
  • LF211533:-41
  • MA447110:-41
  • ENST00000369980.8:43
  • NM_001569.4:43
  • NM_001025242.2:43
  • NM_001025243.2:43
  • ENST00000369973.7:48
  • L76191:54
  • BC054000:55
  • ENST00000369974.6:69
  • BC014963:69
  • AB463802:130
  • EU831427:131
  • EU831520:131
  • AM392624:131
  • AM393211:131
  • ENST00000393687.6:133
  • ENST00000429936.6:133
  • AF346607:133
  • DQ054788:133
  • ENST00000444230.5:145
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:40
Nearest PromoterID:NR_031757
Entrez ID:100313781
Nearest Unigene:
Nearest Refseq:NR_031757
Nearest Ensembl:ENSG00000284286
Gene Name:
Gene Alias:hsa-mir-718
Gene Type:ncRNA
CpG%:0.125000
GC%:0.777778
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):




















Property "Nearest transcripts" (as page type) with input value "ENST00000390190.4:-36 NR_031757.1:-36 LG052088:-36 LY480963:-36 LY495854:-36 LY496504:-36 LY497447:-36 LY499371:-36 LY500047:-36 LZ238725:-36 MA349127:-36 MS869019:-36 MS880686:-36 MS884634:-36 MS885166:-36 MS994512:-36 MA806180:-36 LY616489:-36 LF211533:-41 MA447110:-41 ENST00000369980.8:43 NM_001569.4:43 NM_001025242.2:43 NM_001025243.2:43 ENST00000369973.7:48 L76191:54 BC054000:55 ENST00000369974.6:69 BC014963:69 AB463802:130 EU831427:131 EU831520:131 AM392624:131 AM393211:131 ENST00000393687.6:133 ENST00000429936.6:133 AF346607:133 DQ054788:133 ENST00000444230.5:145" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.