rfhg_240646.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_240646.1
Species:human
Chr:chrX
Start:154541360
End:154541407
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:pELS,CTCF-bound (EH38D4322620,EH38E2774382)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:
    Gene_symbol:
    Gene_synonyms:
    Gene_source:



    TATA-Box annotation


    Distance to TSS:-829
    Nearest PromoterID:NM_001321396
    Entrez ID:8517
    Nearest Unigene:Hs.43505
    Nearest Refseq:NM_003639
    Nearest Ensembl:ENSG00000269335
    Gene Name:
    Gene Alias:AMCBX1|EDAID1|FIP-3|FIP3|Fip3p|IKK-gamma|IKKAP1|IKKG|IMD33|IP|IP1|IP2|IPD2|NEMO|ZC2HC9
    Gene Type:protein-coding
    CpG%:0.042553
    GC%:0.583333
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):