rfhg_25503.1

Basic information about the TSS

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TSS ID: rfhg_25503.1 TSS ID(Version3): hg_19841.1 hg_19842.1 Species: human Chr: chr2		Start: 38778184 End: 38778237 Strand: +
Source datasets	FANTOM5|EPD|DBTSS|DRA000914|ENCODE|PRJNA548673|PRJNA401781 |PRJNA615891|PRJDB5282|PRJNA4843412|DRA013844|PRJNA597322
Protocol	CAGE|TSS_database|TSS-seq|ReCappable-seq|RAMPAGE |oligo_capping|SLIC_CAGE|TIF-seq2|C1CAGE|NETCAGE|STRIPE-seq
TSS cluster detected*	16

  * The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

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Description:	PLS,CTCF-bound (EH38D3111704,EH38E1989477)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENST00000409566.1:0 ENST00000281950.8:0 AK315627:0 AK027112:0 GeneID: 79833 HGNC/MGI_ID: HGNC:20044 UniProt_ID: B8ZZ85 Q8WXD5 Nearer transcript ids and distances: BC018195:7

Gene_name: gem nuclear organelle associated protein 6 Gene_symbol: GEMIN6 Gene_synonyms: FLJ23459 Gene_source: HGNC:20044

TATA-Box annotation

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Distance to TSS:	0
Nearest PromoterID:	NM_024775
Entrez ID:	79833
Nearest Unigene:	Hs.143818
Nearest Refseq:	NM_024775
Nearest Ensembl:	ENSG00000152147
Gene Name:	gem nuclear organelle associated protein 6
Gene Alias:	-
Gene Type:	protein-coding
CpG%:	0.094340
GC%:	0.592593
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.