rfhg_27195.1

Basic information about the TSS

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TSS ID: rfhg_27195.1 Species: human Chr: chr2		Start: 62506138 End: 62506229 Strand: -
Source datasets	PRJDB5282|PRJNA4843412|DRA013844
Protocol	C1CAGE|NETCAGE|CAGE
TSS cluster detected*	3

  * The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

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Description:	PLS (EH38D3131207,EH38E2002682)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENST00000335390.6:0 GeneID: 200728 HGNC/MGI_ID: HGNC:26623 UniProt_ID: Q86X19 Nearer transcript ids and distances: KJ900413:6 HQ448043:6 CU690418:6 BC047439:-112 ENST00000494919.1:-240 AK091902:-240 view more...

Gene_name: transmembrane protein 17 Gene_symbol: TMEM17 Gene_synonyms: FLJ34583 Gene_source: HGNC:26623

TATA-Box annotation

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Distance to TSS:	12
Nearest PromoterID:	NM_198276
Entrez ID:	200728
Nearest Unigene:	Hs.308028
Nearest Refseq:	NM_198276
Nearest Ensembl:	ENSG00000186889
Gene Name:	transmembrane protein 17
Gene Alias:	-
Gene Type:	protein-coding
CpG%:	0.120879
GC%:	0.728261
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.