rfhg_27973.1

Basic information about the TSS

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TSS ID: rfhg_27973.1 TSS ID(Version3): hg_20845.1 Species: human Chr: chr2		Start: 70258089 End: 70258167 Strand: +
Source datasets	FANTOM5|EPD|DRA000914|ENCODE|PRJNA401781|PRJNA597322 |PRJNA615891|PRJNA4843412|PRJNA548673|PRJDB5282|DRA013844
Protocol	CAGE|TSS_database|RAMPAGE|STRIPE-seq|SLIC_CAGE|NETCAGE |TIF-seq2|ReCappable-seq|C1CAGE|oligo_capping
TSS cluster detected*	15

  * The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

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Description:	PLS,CTCF-bound (EH38D3138304,EH38E2007916)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENST00000433351.7:0 ENST00000264441.9:0 AF181490:0 BC051891:0 AY359063:0 BC033815:0 AK314453:0 AK303043:0 BC022259:0 AK225302:0 AB020715:0 AB384041:0 DQ890801:0 DQ893956:0 CU689758:0 GeneID: 51449 HGNC/MGI_ID: HGNC:20588 UniProt_ID: B7Z8A2 F8W8W4 Q9UHG3 Nearer transcript ids and distances: ENST00000451279.1:252 AK296478:252 ENST00000414812.5:-363 AK316013:-379 view more...

Gene_name: prenylcysteine oxidase 1 Gene_symbol: PCYOX1 Gene_synonyms: KIAA0908 PCL1 Gene_source: HGNC:20588

TATA-Box annotation

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Distance to TSS:	-9
Nearest PromoterID:	NM_016297
Entrez ID:	51449
Nearest Unigene:	Hs.567502
Nearest Refseq:	NM_016297
Nearest Ensembl:	ENSG00000116005
Gene Name:	prenylcysteine oxidase 1
Gene Alias:	PCL1
Gene Type:	protein-coding
CpG%:	0.089744
GC%:	0.721519
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.