rfhg_28421.1

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Basic information about the TSS


TSS ID:rfhg_28421.1
Species:human
Chr:chr2
Start:74455078
End:74455125
Strand:+
Source datasetsPRJDB5282|PRJNA401781|PRJNA4843412|PRJNA548673|DRA013844
|PRJNA615891|PRJNA597322
ProtocolC1CAGE|oligo_capping|CAGE|RAMPAGE|NETCAGE|SLIC_CAGE
|TIF-seq2|ReCappable-seq|STRIPE-seq
TSS cluster detected*11

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D3142080,EH38E2010417)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000431187.5:0
ENST00000233331.12:0
ENST00000452361.5:0
ENST00000494986.5:0
ENST00000441673.2:0
ENST00000409917.5:0
ENST00000471577.5:0
ENST00000473618.5:0
ENST00000409493.3:0
ENST00000469849.1:0
AK295889:0
AK295901:0
BC039617:0
BC064425:0
AB054538:0
BC050666:0
GeneID:83444
HGNC/MGI_ID:HGNC:13324 HGNC:49199
UniProt_ID:B4DJ22 B4DJ31 B8ZZ93 B8ZZH7 C9JKY0 F8WCL7 J3KQ70 Q9C086
Nearer transcript ids and distances:
  • NR_037849.1:-55
  • LF207227:-222
  • MA442804:-222
  • ENST00000455562.1:367
view more...
Gene_name:INO80 complex subunit B; INO80B-WBP1 readthrough (NMD candidate)
Gene_symbol:INO80B INO80B-WBP1
Gene_synonyms:HMGIYL4 IES2 PAP-1BP PAPA-1 hIes2
Gene_source:HGNC:13324 HGNC:49199



TATA-Box annotation


Distance to TSS:14
Nearest PromoterID:NM_031288
Entrez ID:83444
Nearest Unigene:Hs.410786
Nearest Refseq:NM_031288
Nearest Ensembl:ENSG00000115274
Gene Name:INO80 complex subunit B; INO80B-WBP1 readthrough (NMD candidate)
Gene Alias:HMGA1L4|HMGIYL4|IES2|PAP-1BP|PAPA-1|PAPA1|ZNHIT4|hIes2
Gene Type:protein-coding
CpG%:0.021277
GC%:0.520833
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.