rfhg_28421.1
From referenceTSS
Basic information about the TSS
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Source datasets | PRJDB5282|PRJNA401781|PRJNA4843412|PRJNA548673|DRA013844 |PRJNA615891|PRJNA597322 | |||||||||||||
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Protocol | C1CAGE|oligo_capping|CAGE|RAMPAGE|NETCAGE|SLIC_CAGE |TIF-seq2|ReCappable-seq|STRIPE-seq | |||||||||||||
TSS cluster detected* | 11 |
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
Description: | PLS,CTCF-bound (EH38D3142080,EH38E2010417) |
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Category: | PLS |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
Distance to TSS: | 14 |
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Nearest PromoterID: | NM_031288 |
Entrez ID: | 83444 |
Nearest Unigene: | Hs.410786 |
Nearest Refseq: | NM_031288 |
Nearest Ensembl: | ENSG00000115274 |
Gene Name: | INO80 complex subunit B; INO80B-WBP1 readthrough (NMD candidate) |
Gene Alias: | HMGA1L4|HMGIYL4|IES2|PAP-1BP|PAPA-1|PAPA1|ZNHIT4|hIes2 |
Gene Type: | protein-coding |
CpG%: | 0.021277 |
GC%: | 0.520833 |
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
TSS expression
Expression data not found.