rfhg_28432.1

Basic information about the TSS

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TSS ID: rfhg_28432.1 TSS ID(Version3): hg_29217.1 Species: human Chr: chr2		Start: 74472621 End: 74472692 Strand: -
Source datasets	FANTOM5|EPD|DRA000914|ENCODE|RAMPAGE|PRJNA401781 |PRJNA4843412|PRJNA548673|PRJNA615891|DRA013844|PRJDB5282
Protocol	CAGE|TSS_database|RAMPAGE|oligo_capping|NETCAGE |ReCappable-seq|SLIC_CAGE|TIF-seq2|C1CAGE
TSS cluster detected*	15

  * The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

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Description:	PLS,CTCF-bound (EH38D3142110,EH38E2010440)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENST00000258105.8:0 ENST00000409710.1:0 ENST00000468875.1:0 BC012163:0 GeneID: 116540 HGNC/MGI_ID: HGNC:16684 UniProt_ID: B9A051 Q96EL3 Nearer transcript ids and distances: ENST00000467349.1:74 LF363233:475 MA598810:475 view more...

Gene_name: mitochondrial ribosomal protein L53 Gene_symbol: MRPL53 Gene_synonyms: Gene_source: HGNC:16684

TATA-Box annotation

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Distance to TSS:	24
Nearest PromoterID:	NM_053050
Entrez ID:	116540
Nearest Unigene:	Hs.534527
Nearest Refseq:	NM_053050
Nearest Ensembl:	ENSG00000204822
Gene Name:	mitochondrial ribosomal protein L53
Gene Alias:	L53MT
Gene Type:	protein-coding
CpG%:	0.070423
GC%:	0.666667
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.