rfhg_30718.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_30718.1
Species:human
Chr:chr2
Start:112433641
End:112433642
Strand:-
Source datasetsDRA000914
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D3165287,EH38E2025298)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000302558.8:-3
GeneID:727851
HGNC/MGI_ID:HGNC:9849
UniProt_ID:O14715
Nearer transcript ids and distances:
  • ENST00000330575.9:111
  • ENST00000496537.1:122
view more...
Gene_name:RANBP2 like and GRIP domain containing 8
Gene_symbol:RGPD8
Gene_synonyms:RanBP2alpha
Gene_source:HGNC:9849



TATA-Box annotation


Distance to TSS:4
Nearest PromoterID:NM_001164463
Entrez ID:727851
Nearest Unigene:Hs.469630
Nearest Refseq:NM_001164463
Nearest Ensembl:ENSG00000169629
Gene Name:RANBP2 like and GRIP domain containing 8
Gene Alias:RANBP2L1|RGP8|RanBP2alpha
Gene Type:protein-coding
CpG%:0.000000
GC%:0.500000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.