rfhg_31912.1

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Basic information about the TSS


TSS ID:rfhg_31912.1
Species:human
Chr:chr2
Start:130756300
End:130756349
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D3178476,EH38E2032900)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:NM_001105195.2:0
NM_001105194.2:0
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENST00000458606.5:-9
  • ENST00000423981.1:-9
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:-20
Nearest PromoterID:NM_001105195
Entrez ID:205147
Nearest Unigene:Hs.369289
Nearest Refseq:NM_152698
Nearest Ensembl:ENSG00000178171
Gene Name:
Gene Alias:FAM123C
Gene Type:protein-coding
CpG%:0.204082
GC%:0.780000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):