rfhg_34531.1

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Basic information about the TSS


TSS ID:rfhg_34531.1
Species:human
Chr:chr2
Start:169694435
End:169694530
Strand:+
Source datasetsPRJNA401781|PRJNA548673|PRJNA615891|PRJNA4843412|DRA013844
ProtocolRAMPAGE|CAGE|oligo_capping|ReCappable-seq|SLIC_CAGE|NETCAGE
|TIF-seq2
TSS cluster detected*9

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D3207034,EH38E2050036)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000616481.4:0
ENST00000616524.4:0
ENST00000617738.4:0
ENST00000359744.8:0
ENST00000438838.5:0
ENST00000438710.5:0
ENST00000449906.5:0
ENST00000498202.6:0
ENST00000272797.8:0
AK314915:0
BC106013:0
GeneID:151230 493911
HGNC/MGI_ID:HGNC:27506 HGNC:28316
UniProt_ID:C9J4G2 C9JD35 C9JZQ7 Q8NBE8 Q8TCD6 S4R3P4
Nearer transcript ids and distances:
    Gene_name:kelch like family member 23; phosphatase, orphan 2
    Gene_symbol:KLHL23 PHOSPHO2
    Gene_synonyms:FLJ37812 MGC22679 MGC2610
    Gene_source:HGNC:27506 HGNC:28316



    TATA-Box annotation


    Distance to TSS:13
    Nearest PromoterID:NM_001008489
    Entrez ID:493911
    Nearest Unigene:Hs.745233
    Nearest Refseq:NM_001008489
    Nearest Ensembl:ENSG00000144362
    Gene Name:kelch like family member 23; phosphatase, orphan 2
    Gene Alias:-
    Gene Type:protein-coding
    CpG%:0.084211
    GC%:0.656250
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.