rfhg_35932.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_35932.1
Species:human
Chr:chr2
Start:178800426
End:178800443
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:dELS,CTCF-bound (EH38D3215088,EH38E2055754)
Category:dELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:
    Gene_symbol:
    Gene_synonyms:
    Gene_source:



    TATA-Box annotation


    Distance to TSS:6989
    Nearest PromoterID:NM_133379
    Entrez ID:7273
    Nearest Unigene:Hs.134602
    Nearest Refseq:NM_003319
    Nearest Ensembl:ENSG00000155657
    Gene Name:
    Gene Alias:CMD1G|CMH9|CMPD4|EOMFC|HMERF|LGMD2J|LGMDR10|MYLK5|SALMY|TMD
    Gene Type:protein-coding
    CpG%:0.058824
    GC%:0.444444
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):