rfhg_37791.1

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Basic information about the TSS


TSS ID:rfhg_37791.1
Species:human
Chr:chr2
Start:206443369
End:206443395
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D3235961,EH38E2069068)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:LF205220:-17
MA440797:-17
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENST00000264377.8:137
  • NM_003812.4:137
  • LF317960:233
  • MA553537:233
  • AB009672:249
  • BC132765:269
  • BC132763:269
  • AJ005580:420
  • AK296844:442
  • ENST00000374415.7:472
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:-150
Nearest PromoterID:NM_003812
Entrez ID:8745
Nearest Unigene:Hs.370287
Nearest Refseq:NM_003812
Nearest Ensembl:ENSG00000114948
Gene Name:
Gene Alias:MDC-3|MDC3
Gene Type:protein-coding
CpG%:0.000000
GC%:0.666667
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):