rfhg_3881.1

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Basic information about the TSS


TSS ID:rfhg_3881.1
TSS ID(Version3):hg_1667.1
Species:human
Chr:chr1
Start:26863118
End:26863166
Strand:+
Source datasetsFANTOM5|EPD|DRA000914|ENCODE|RAMPAGE|PRJNA4843412
|PRJNA401781|PRJNA548673|PRJNA615891|PRJDB5282|DRA013844
ProtocolCAGE|TSS_database|RAMPAGE|NETCAGE|ReCappable-seq|SLIC_CAGE
|TIF-seq2|C1CAGE
TSS cluster detected*13

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D2142397,EH38E1330885)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000339276.6:0
BC023552:0
AF029082:0
BC001550:0
BC000329:0
BC002995:0
BC000995:0
GeneID:2810
HGNC/MGI_ID:HGNC:10773
UniProt_ID:P31947
Nearer transcript ids and distances:
  • AB464718:44
  • M93010:44
  • DQ894162:45
  • CU674492:46
  • KJ896908:46
  • KJ901461:46
  • CR541926:47
  • CR541905:47
view more...
Gene_name:stratifin
Gene_symbol:SFN
Gene_synonyms:YWHAS
Gene_source:HGNC:10773



TATA-Box annotation


Distance to TSS:-7
Nearest PromoterID:NM_006142
Entrez ID:2810
Nearest Unigene:Hs.523718
Nearest Refseq:NM_006142
Nearest Ensembl:ENSG00000175793
Gene Name:stratifin
Gene Alias:YWHAS
Gene Type:protein-coding
CpG%:0.020833
GC%:0.571429
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.