rfhg_39004.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_39004.1
Species:human
Chr:chr2
Start:218382061
End:218382076
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D3245366,EH38E2075383)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:
    Gene_symbol:
    Gene_synonyms:
    Gene_source:



    TATA-Box annotation


    Distance to TSS:-205
    Nearest PromoterID:NM_000578
    Entrez ID:6556
    Nearest Unigene:Hs.591607
    Nearest Refseq:NM_000578
    Nearest Ensembl:ENSG00000018280
    Gene Name:
    Gene Alias:LSH|NRAMP|NRAMP1
    Gene Type:protein-coding
    CpG%:0.000000
    GC%:0.562500
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):