rfhg_39063.1

Basic information about the TSS

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TSS ID: rfhg_39063.1 Species: human Chr: chr2		Start: 218671971 End: 218672009 Strand: -
Source datasets	PRJDB5282|PRJNA401781|PRJNA548673|PRJNA615891|PRJNA4843412 |DRA013844
Protocol	C1CAGE|CAGE|RAMPAGE|oligo_capping|ReCappable-seq|SLIC_CAGE |NETCAGE|TIF-seq2
TSS cluster detected*	10

  * The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

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Description:	PLS,CTCF-bound (EH38D3245565,EH38E2075538)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENST00000473034.5:0 ENST00000295704.7:0 ENST00000463188.5:0 AK289501:0 BC015612:0 AK023968:0 BC028167:0 AK222525:0 GeneID: 64320 HGNC/MGI_ID: HGNC:14662 UniProt_ID: Q96BH1 Nearer transcript ids and distances: JF432200:1 KJ894545:1 AB527514:1 CU677361:1 ENST00000423170.1:4 LF318613:97 MA554190:97 view more...

Gene_name: ring finger protein 25 Gene_symbol: RNF25 Gene_synonyms: AO7 FLJ13906 Gene_source: HGNC:14662

TATA-Box annotation

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Distance to TSS:	12
Nearest PromoterID:	NM_022453
Entrez ID:	64320
Nearest Unigene:	Hs.471403
Nearest Refseq:	NM_022453
Nearest Ensembl:	ENSG00000163481
Gene Name:	ring finger protein 25
Gene Alias:	AO7
Gene Type:	protein-coding
CpG%:	0.105263
GC%:	0.615385
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.