rfhg_39341.1

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Basic information about the TSS


TSS ID:rfhg_39341.1
TSS ID(Version3):hg_25519.1
Species:human
Chr:chr2
Start:219501684
End:219501723
Strand:+
Source datasetsFANTOM5|PRJNA401781
ProtocolCAGE|RAMPAGE|oligo_capping
TSS cluster detected*4

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:pELS (EH38D3246428,EH38E2076241)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000683106.1:-440
GeneID:29926
HGNC/MGI_ID:HGNC:22923
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:GDP-mannose pyrophosphorylase A
    Gene_symbol:GMPPA
    Gene_synonyms:
    Gene_source:HGNC:22923



    TATA-Box annotation


    Distance to TSS:2812
    Nearest PromoterID:NM_205847
    Entrez ID:29926
    Nearest Unigene:Hs.27059
    Nearest Refseq:NM_013335
    Nearest Ensembl:ENSG00000144591
    Gene Name:GDP-mannose pyrophosphorylase A
    Gene Alias:AAMR
    Gene Type:protein-coding
    CpG%:0.000000
    GC%:0.350000
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.