rfhg_40599.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_40599.1
Species:human
Chr:chr2
Start:233712906
End:233712949
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:pELS (EH38D3258777,EH38E2084521)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000373414.4:0
GeneID:54579
HGNC/MGI_ID:HGNC:12537
UniProt_ID:Q5DSZ9
Nearer transcript ids and distances:
  • BC141470:43
  • AY435140:43
  • DQ383514:334
view more...
Gene_name:UDP glucuronosyltransferase family 1 member A5
Gene_symbol:UGT1A5
Gene_synonyms:UGT1E
Gene_source:HGNC:12537



TATA-Box annotation


Distance to TSS:-65
Nearest PromoterID:NM_019078
Entrez ID:54579
Nearest Unigene:Hs.554822
Nearest Refseq:NM_019078
Nearest Ensembl:ENSG00000240224
Gene Name:UDP glucuronosyltransferase family 1 member A5
Gene Alias:UDPGT|UDPGT 1-5|UGT1E
Gene Type:protein-coding
CpG%:0.023256
GC%:0.409091
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.