rfhg_41142.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_41142.1
Species:human
Chr:chr2
Start:239195238
End:239195273
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:dELS (EH38D3264815,EH38E2088883)
Category:dELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:BC008026:-184
GeneID:85009
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • KJ900884:265
Gene_name:uncharacterized LOC85009
Gene_symbol:MGC16025
Gene_synonyms:
Gene_source:EntrezGene:85009



TATA-Box annotation


Distance to TSS:202
Nearest PromoterID:NR_026664
Entrez ID:85009
Nearest Unigene:Hs.744565
Nearest Refseq:NM_032923
Nearest Ensembl:
Gene Name:uncharacterized LOC85009
Gene Alias:-
Gene Type:ncRNA
CpG%:0.000000
GC%:0.388889
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.