rfhg_4211.1

Basic information about the TSS

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TSS ID: rfhg_4211.1 TSS ID(Version3): hg_11349.1 Species: human Chr: chr1		Start: 28232983 End: 28233059 Strand: -
Source datasets	FANTOM5|EPD|DRA000914|ENCODE|PRJNA597322|PRJNA401781 |PRJNA615891|PRJNA548673|PRJNA4843412|DRA013844|PRJDB5282
Protocol	CAGE|TSS_database|STRIPE-seq|SLIC_CAGE|TIF-seq2 |oligo_capping|ReCappable-seq|NETCAGE|RAMPAGE|C1CAGE
TSS cluster detected*	15

  * The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

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Description:	PLS,CTCF-bound (EH38D2143832,EH38E1332116)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENST00000263697.6:0 ENST00000489277.5:0 ENST00000482674.5:0 ENST00000488868.1:0 BC033159:0 AF083190:0 BX538122:0 AK300797:0 CR456900:0 GeneID: 22826 HGNC/MGI_ID: HGNC:15470 UniProt_ID: O75937 Nearer transcript ids and distances:

Gene_name: DnaJ heat shock protein family (Hsp40) member C8 Gene_symbol: DNAJC8 Gene_synonyms: SPF31 Gene_source: HGNC:15470

TATA-Box annotation

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Distance to TSS:	8
Nearest PromoterID:	NR_159454
Entrez ID:	22826
Nearest Unigene:	Hs.433540
Nearest Refseq:	NM_014280
Nearest Ensembl:	ENSG00000126698
Gene Name:	DnaJ heat shock protein family (Hsp40) member C8
Gene Alias:	HSPC331|SPF31
Gene Type:	protein-coding
CpG%:	0.092105
GC%:	0.636364
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.