rfhg_4286.1

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Basic information about the TSS


TSS ID:rfhg_4286.1
Species:human
Chr:chr1
Start:28648790
End:28648796
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D2144234,EH38E1332454)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:LQ660982:-149
LY536149:-149
LZ234272:-149
MA363522:-149
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENST00000602813.1:-190
  • NR_004407.1:-190
  • MA813924:-190
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:193
Nearest PromoterID:NR_004407
Entrez ID:26824
Nearest Unigene:Hs.640266
Nearest Refseq:NR_004407
Nearest Ensembl:ENSG00000274978
Gene Name:
Gene Alias:RNU11-1|U11
Gene Type:snRNA
CpG%:0.000000
GC%:0.285714
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):