rfhg_44023.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_44023.1
Species:human
Chr:chr3
Start:39093499
End:39093510
Strand:+
Source datasetsPRJNA401781
ProtocolRAMPAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:-
Category:-

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:BC012861:388
GeneID:57599
HGNC/MGI_ID:HGNC:30914
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:WD repeat domain 48
    Gene_symbol:WDR48
    Gene_synonyms:Bun62 KIAA1449 P80 SPG60
    Gene_source:HGNC:30914



    TATA-Box annotation


    Distance to TSS:14123
    Nearest PromoterID:NM_001278790
    Entrez ID:64689
    Nearest Unigene:Hs.721946
    Nearest Refseq:NM_031899
    Nearest Ensembl:ENSG00000114745
    Gene Name:WD repeat domain 48
    Gene Alias:GOLPH5|GRASP65|P65
    Gene Type:protein-coding
    CpG%:0.000000
    GC%:0.083333
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.