rfhg_44421.1

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Basic information about the TSS


TSS ID:rfhg_44421.1
TSS ID(Version3):hg_41856.1
hg_41857.1
Species:human
Chr:chr3
Start:44439846
End:44439933
Strand:-
Source datasetsFANTOM5|PRJNA401781|PRJNA597322
ProtocolCAGE|RAMPAGE|oligo_capping|STRIPE-seq
TSS cluster detected*5

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:dELS,CTCF-bound (EH38D3420536,EH38E2196677)
Category:dELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000636468.1:0
GeneID:102724231
HGNC/MGI_ID:HGNC:44570
UniProt_ID:
Nearer transcript ids and distances:
  • ENST00000637612.1:-13
Gene_name:chromosome 3 open reading frame 86, pseudogene
Gene_symbol:C3orf86P
Gene_synonyms:
Gene_source:HGNC:44570



TATA-Box annotation


Distance to TSS:11967
Nearest PromoterID:NR_144436
Entrez ID:100506319
Nearest Unigene:Hs.180744
Nearest Refseq:NR_144436
Nearest Ensembl:ENSG00000283036
Gene Name:chromosome 3 open reading frame 86, pseudogene
Gene Alias:-
Gene Type:ncRNA
CpG%:0.011494
GC%:0.454545
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.