rfhg_45349.1
Basic information about the TSS
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| Source datasets | PRJNA4843412|DRA013844 | |||||||||||||
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| Protocol | NETCAGE|CAGE | |||||||||||||
| TSS cluster detected* | 2 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
| Description: | PLS,CTCF-bound (EH38D3425714,EH38E2200684) |
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| Category: | PLS |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 1 |
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| Nearest PromoterID: | NM_001244937 |
| Entrez ID: | 4486 |
| Nearest Unigene: | Hs.517973 |
| Nearest Refseq: | NM_002447 |
| Nearest Ensembl: | ENSG00000164078 |
| Gene Name: | macrophage stimulating 1 receptor |
| Gene Alias: | CD136|CDw136|NPCA3|PTK8|RON |
| Gene Type: | protein-coding |
| CpG%: | 0.058824 |
| GC%: | 0.555556 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
TSS expression
Property "Nearest transcripts" (as page type) with input value "LF208619:-7 MA444196:-7 JN983806:227 X70040:227 ENST00000612032.4:255 ENST00000613534.4:255 ENST00000344206.8:255 ENST00000468525.5:255 ENST00000493535.5:255 ENST00000485044.5:255 ENST00000497001.1:255 HQ908652:255 JN689381:255 JN689382:255 EU826584:255 EU826583:255 EU826585:255 EU826582:255" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.