rfhg_46630.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_46630.1
Species:human
Chr:chr3
Start:63912067
End:63912121
Strand:+
Source datasetsPRJNA4843412|DRA013844
ProtocolNETCAGE|CAGE
TSS cluster detected*2

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D3438253,EH38E2209035)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:NM_001377406.1:0
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENST00000487717.5:-138
  • ENST00000522345.2:467
  • BC166666:478
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:-322
Nearest PromoterID:NR_148359
Entrez ID:100861563
Nearest Unigene:
Nearest Refseq:NR_148359
Nearest Ensembl:ENSG00000280620
Gene Name:
Gene Alias:ATXN7-AS1
Gene Type:ncRNA
CpG%:0.185185
GC%:0.781818
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):