rfhg_46840.1

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Basic information about the TSS


TSS ID:rfhg_46840.1
Species:human
Chr:chr3
Start:69080351
End:69080390
Strand:-
Source datasetsPRJNA401781|PRJNA548673|PRJNA615891|PRJNA4843412|DRA013844
|PRJDB5282|PRJNA597322
ProtocolCAGE|RAMPAGE|ReCappable-seq|SLIC_CAGE|TIF-seq2
|oligo_capping|NETCAGE|C1CAGE|STRIPE-seq
TSS cluster detected*11

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D3442576,EH38E2211867)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000361055.9:0
ENST00000415609.6:0
ENST00000461934.5:0
ENST00000465627.5:0
ENST00000630585.1:0
ENST00000465108.5:0
ENST00000493957.5:0
ENST00000466763.5:0
ENST00000485424.1:0
ENST00000464605.1:0
AL117566:0
AK002159:0
BC022853:0
CR533537:0
AK316540:0
AK298878:0
AK289392:0
AK314751:0
GeneID:9039
HGNC/MGI_ID:HGNC:12470
UniProt_ID:B2RBP3 F8W8D4 F8WAT6 F8WF86 J3JZZ9 Q8TBC4
Nearer transcript ids and distances:
  • ENST00000349511.8:-18
  • AF046024:202
view more...
Gene_name:ubiquitin like modifier activating enzyme 3
Gene_symbol:UBA3
Gene_synonyms:NAE2 hUba3
Gene_source:HGNC:12470



TATA-Box annotation


Distance to TSS:3
Nearest PromoterID:NM_001363861
Entrez ID:9039
Nearest Unigene:Hs.154320
Nearest Refseq:NM_003968
Nearest Ensembl:ENSG00000144744
Gene Name:ubiquitin like modifier activating enzyme 3
Gene Alias:NAE2|UBE1C|hUBA3
Gene Type:protein-coding
CpG%:0.102564
GC%:0.650000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.