rfhg_49344.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_49344.1
Species:human
Chr:chr3
Start:122416036
End:122416104
Strand:-
Source datasetsPRJNA4843412|DRA013844
ProtocolNETCAGE|CAGE
TSS cluster detected*2

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D3476437,EH38E2232150)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000330689.6:0
GeneID:54554
HGNC/MGI_ID:HGNC:17826
UniProt_ID:Q86VZ2
Nearer transcript ids and distances:
  • BC025762:1
  • AK002149:273
  • AK315186:383
  • BC043494:412
view more...
Gene_name:WD repeat domain 5B
Gene_symbol:WDR5B
Gene_synonyms:FLJ11287
Gene_source:HGNC:17826



TATA-Box annotation


Distance to TSS:-8
Nearest PromoterID:NM_019069
Entrez ID:54554
Nearest Unigene:Hs.567513
Nearest Refseq:NM_019069
Nearest Ensembl:ENSG00000196981
Gene Name:WD repeat domain 5B
Gene Alias:-
Gene Type:protein-coding
CpG%:0.073529
GC%:0.579710
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.