rfhg_50810.1

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Basic information about the TSS


TSS ID:rfhg_50810.1
TSS ID(Version3):hg_38831.1
Species:human
Chr:chr3
Start:139389792
End:139389873
Strand:+
Source datasetsFANTOM5|PRJNA4843412|PRJDB5282|DRA013844|PRJNA401781
|PRJNA548673|PRJNA615891
ProtocolCAGE|NETCAGE|C1CAGE|ReCappable-seq|SLIC_CAGE|TIF-seq2
|oligo_capping|RAMPAGE
TSS cluster detected*11

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D3491516,EH38E2242450)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000658348.1:0
ENST00000504670.6:0
ENST00000507362.5:0
ENST00000512622.1:0
ENST00000510068.5:0
ENST00000515247.5:0
ENST00000660194.1:0
GeneID:100507291
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENST00000514729.1:3
  • ENST00000655667.1:3
  • ENST00000662234.1:-7
  • ENST00000653359.1:-31
  • ENST00000661884.1:126
view more...
Gene_name:COPB2 divergent transcript
Gene_symbol:COPB2-DT
Gene_synonyms:
Gene_source:EntrezGene:100507291



TATA-Box annotation


Distance to TSS:29
Nearest PromoterID:NR_121609
Entrez ID:100507291
Nearest Unigene:Hs.97661
Nearest Refseq:NR_121608
Nearest Ensembl:ENSG00000248932
Gene Name:COPB2 divergent transcript
Gene Alias:-
Gene Type:ncRNA
CpG%:0.061728
GC%:0.646341
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.