rfhg_51065.1

Basic information about the TSS

TSS ID:	rfhg_51065.1
Species:	human
Chr:	chr3

Start:	142964176
End:	142964180
Strand:	+

Source datasets

FANTOM5

Protocol

CAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	PLS,CTCF-bound (EH38D3494539,EH38E2244452)
Category:	PLS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	ENST00000478823.1:-16
GeneID:	101927832
HGNC/MGI_ID:	HGNC:50861
UniProt_ID:
Nearer transcript ids and distances:	ENST00000607937.1:-46 ENST00000608349.5:-118 ENST00000497652.5:-118 NR_125393.1:-118 BC062727:-136 ENST00000493825.1:260 ENST00000593321.5:317 ENST00000598139.5:317 ENST00000598787.5:317 ENST00000595774.5:317 ENST00000595248.1:317 ENST00000600150.5:317 ENST00000625677.1:402 view more...

Gene_name:	PAQR9 antisense RNA 1
Gene_symbol:	PAQR9-AS1
Gene_synonyms:
Gene_source:	HGNC:50861

TATA-Box annotation

Distance to TSS:	120
Nearest PromoterID:	NR_125393
Entrez ID:	101927832
Nearest Unigene:	Hs.710007
Nearest Refseq:	NR_125393
Nearest Ensembl:	ENSG00000241570
Gene Name:	PAQR9 antisense RNA 1
Gene Alias:	-
Gene Type:	ncRNA
CpG%:	0.000000
GC%:	0.400000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.

Property "Nearest transcripts" (as page type) with input value "ENST00000607937.1:-46 ENST00000608349.5:-118 ENST00000497652.5:-118 NR_125393.1:-118 BC062727:-136 ENST00000493825.1:260 ENST00000593321.5:317 ENST00000598139.5:317 ENST00000598787.5:317 ENST00000595774.5:317 ENST00000595248.1:317 ENST00000600150.5:317 ENST00000625677.1:402" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.