rfhg_51066.1

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Basic information about the TSS


TSS ID:rfhg_51066.1
Species:human
Chr:chr3
Start:143001426
End:143001479
Strand:-
Source datasetsPRJNA401781
Protocololigo_capping
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D3494575,EH38E2244483)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:BC040051:0
GeneID:100289361
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • LF378115:328
  • MA613692:328
view more...
Gene_name:uncharacterized LOC100289361
Gene_symbol:LOC100289361
Gene_synonyms:
Gene_source:EntrezGene:100289361



TATA-Box annotation


Distance to TSS:15
Nearest PromoterID:NR_034032
Entrez ID:100289361
Nearest Unigene:Hs.599649
Nearest Refseq:NR_034032
Nearest Ensembl:ENSG00000268129
Gene Name:uncharacterized LOC100289361
Gene Alias:-
Gene Type:ncRNA
CpG%:0.075472
GC%:0.555556
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.