rfhg_53155.1

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Basic information about the TSS


TSS ID:rfhg_53155.1
Species:human
Chr:chr3
Start:179147960
End:179147977
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D3521859,EH38E2261646)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:BC032034:0
GeneID:101928739
HGNC/MGI_ID:HGNC:52932
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:PIK3CA divergent transcript
    Gene_symbol:PIK3CA-DT
    Gene_synonyms:
    Gene_source:HGNC:52932



    TATA-Box annotation


    Distance to TSS:5
    Nearest PromoterID:NR_125401
    Entrez ID:101928739
    Nearest Unigene:Hs.434553
    Nearest Refseq:NR_125401
    Nearest Ensembl:ENSG00000229102
    Gene Name:PIK3CA divergent transcript
    Gene Alias:-
    Gene Type:ncRNA
    CpG%:0.058824
    GC%:0.277778
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.