rfhg_53239.1

Basic information about the TSS

TSS ID:	rfhg_53239.1
Species:	human
Chr:	chr3

Start:	180679469
End:	180679513
Strand:	-

Source datasets

FANTOM5

Protocol

CAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	PLS,CTCF-bound (EH38D3522950,EH38E2262298)
Category:	PLS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	ENST00000476379.6:0 ENST00000651046.1:0 ENST00000652024.1:0 AK304270:0
GeneID:	339829
HGNC/MGI_ID:	HGNC:25244
UniProt_ID:	A0A494C1Q3 Q9UFE4
Nearer transcript ids and distances:	ENST00000650641.1:10

Gene_name:	coiled-coil domain containing 39
Gene_symbol:	CCDC39
Gene_synonyms:	CFAP59 CILD14 DKFZp434A128 FAP59
Gene_source:	HGNC:25244

TATA-Box annotation

Distance to TSS:	-2
Nearest PromoterID:	NM_181426
Entrez ID:	339829
Nearest Unigene:	Hs.712820
Nearest Refseq:	NM_181426
Nearest Ensembl:	ENSG00000284862
Gene Name:	coiled-coil domain containing 39
Gene Alias:	CILD14\|FAP59
Gene Type:	protein-coding
CpG%:	0.090909
GC%:	0.688889
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.