rfhg_53295.1

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Basic information about the TSS


TSS ID:rfhg_53295.1
Species:human
Chr:chr3
Start:181711699
End:181711718
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D3523555,EH38E2262669)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Transcript_name:
Distance:
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Gene_name:SOX2
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:-217
Nearest PromoterID:NM_003106
Entrez ID:6657
Nearest Unigene:Hs.518438
Nearest Refseq:NM_003106
Nearest Ensembl:ENSG00000181449
Gene Name:SOX2
Gene Alias:ANOP3|MCOPS3
Gene Description:SRY-box transcription factor 2
Gene Type:protein-coding
CpG%:0.000000
GC%:0.450000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):