rfhg_54582.1

Basic information about the TSS

TSS ID:	rfhg_54582.1
Species:	human
Chr:	chr3

Start:	194487187
End:	194487195
Strand:	+

Source datasets

FANTOM5

Protocol

CAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	-
Category:	-

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	AK091527:-32
GeneID:	401106
HGNC/MGI_ID:	HGNC:48570
UniProt_ID:
Nearer transcript ids and distances:	ENST00000671306.1:-41 ENST00000437597.2:-41 ENST00000662856.1:-41 ENST00000665891.1:-47 ENST00000661941.1:-47 NR_033929.1:-47 ENST00000448892.2:259 ENST00000670064.1:261 ENST00000656823.1:423 ENST00000653684.1:479 view more...

Gene_name:	ATP13A3 divergent transcript
Gene_symbol:	ATP13A3-DT
Gene_synonyms:
Gene_source:	HGNC:48570

TATA-Box annotation

Distance to TSS:	51
Nearest PromoterID:	NR_033929
Entrez ID:	401106
Nearest Unigene:	Hs.407087
Nearest Refseq:	NR_033929
Nearest Ensembl:
Gene Name:	ATP13A3 divergent transcript
Gene Alias:	-
Gene Type:	ncRNA
CpG%:	0.125000
GC%:	0.777778
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.