rfhg_55.1
From referenceTSS
Basic information about the TSS
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| Source datasets | PRJNA4843412|DRA013844|PRJDB5282|PRJNA401781|PRJNA548673 |PRJNA615891|PRJNA597322 | |||||||||||||
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| Protocol | NETCAGE|CAGE|C1CAGE|RAMPAGE|ReCappable-seq|SLIC_CAGE |STRIPE-seq|oligo_capping | |||||||||||||
| TSS cluster detected* | 10 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
| Description: | PLS,CTCF-bound (EH38D2115324,EH38E1310158) |
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| Category: | PLS |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 48 |
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| Nearest PromoterID: | NR_033908 |
| Entrez ID: | 100288069 |
| Nearest Unigene: | Hs.527521 |
| Nearest Refseq: | NR_033908 |
| Nearest Ensembl: | |
| Gene Name: | uncharacterized LOC100288069 |
| Gene Alias: | - |
| Gene Type: | ncRNA |
| CpG%: | 0.117647 |
| GC%: | 0.652174 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
TSS expression
Expression data not found.