rfhg_55255.1

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Basic information about the TSS


TSS ID:rfhg_55255.1
TSS ID(Version3):hg_46553.1
Species:human
Chr:chr4
Start:1289860
End:1289928
Strand:+
Source datasetsFANTOM5|EPD|DRA000914|ENCODE|DRA013844|PRJDB5282
|PRJNA4843412|PRJNA401781|PRJNA548673|PRJNA615891
ProtocolCAGE|TSS_database|C1CAGE|NETCAGE|oligo_capping|RAMPAGE
|ReCappable-seq|SLIC_CAGE|TIF-seq2
TSS cluster detected*14

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D3539744,EH38E2274683)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000505177.6:0
ENST00000513301.5:0
ENST00000512308.5:0
ENST00000503653.5:0
ENST00000264750.10:0
ENST00000303400.9:0
ENST00000509254.5:0
ENST00000502558.5:0
ENST00000514708.5:0
ENST00000508634.1:0
ENST00000503693.1:0
ENST00000509531.5:0
BC001225:0
AK300572:0
AK001088:0
AK022586:0
AK094253:0
AK296174:0
AK022515:0
AY236486:0
AK308901:0
AF084928:0
BC006470:0
GeneID:10296
HGNC/MGI_ID:HGNC:13731
UniProt_ID:B4DJP8 B4DUB2 D6R8Z3 D6RA86 D6RDW4 D6RE80 D6REW7 D6RIB6 E7ESC7 Q7L5Y9
Nearer transcript ids and distances:
  • AY189687:10
  • KJ902085:11
  • BT006957:19
view more...
Gene_name:macrophage erythroblast attacher, E3 ubiquitin ligase
Gene_symbol:MAEA
Gene_synonyms:EMP GID9 HLC-10 p44EMLP
Gene_source:HGNC:13731



TATA-Box annotation


Distance to TSS:3
Nearest PromoterID:NM_005882
Entrez ID:10296
Nearest Unigene:Hs.139896
Nearest Refseq:NM_005882
Nearest Ensembl:ENSG00000090316
Gene Name:macrophage erythroblast attacher, E3 ubiquitin ligase
Gene Alias:EMLP|EMP|GID9|HLC-10|P44EMLP|PIG5
Gene Type:protein-coding
CpG%:0.147059
GC%:0.695652
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.