rfhg_55837.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_55837.1
Species:human
Chr:chr4
Start:7103376
End:7103400
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D3545791,EH38E2278853)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000663544.1:0
ENST00000499242.2:0
ENST00000501888.2:0
BC045770:0
AK094096:0
GeneID:730971
HGNC/MGI_ID:HGNC:53379
UniProt_ID:
Nearer transcript ids and distances:
  • ENST00000504402.1:47
Gene_name:long intergenic non-protein coding RNA 2447
Gene_symbol:LINC02447
Gene_synonyms:
Gene_source:HGNC:53379



TATA-Box annotation


Distance to TSS:-12
Nearest PromoterID:NR_027441
Entrez ID:730971
Nearest Unigene:Hs.591718
Nearest Refseq:NR_027441
Nearest Ensembl:
Gene Name:long intergenic non-protein coding RNA 2447
Gene Alias:-
Gene Type:ncRNA
CpG%:0.083333
GC%:0.640000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.