rfhg_56121.1

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Basic information about the TSS


TSS ID:rfhg_56121.1
Species:human
Chr:chr4
Start:13531376
End:13531406
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS (EH38D3551110,EH38E2282094)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000628853.1:4
AK311420:4
GeneID:285547
HGNC/MGI_ID:HGNC:27738
UniProt_ID:
Nearer transcript ids and distances:
  • ENST00000627163.2:-11
  • NR_034054.1:-11
  • AK096368:-11
view more...
Gene_name:long intergenic non-protein coding RNA 1097
Gene_symbol:LINC01097
Gene_synonyms:
Gene_source:HGNC:27738



TATA-Box annotation


Distance to TSS:26
Nearest PromoterID:NR_034054
Entrez ID:285547
Nearest Unigene:Hs.381892
Nearest Refseq:NR_034054
Nearest Ensembl:ENSG00000281202
Gene Name:long intergenic non-protein coding RNA 1097
Gene Alias:-
Gene Type:ncRNA
CpG%:0.100000
GC%:0.677419
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.