rfhg_56370.1

Basic information about the TSS

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TSS ID: rfhg_56370.1 TSS ID(Version3): hg_47045.1 Species: human Chr: chr4		Start: 17614625 End: 17614652 Strand: +
Source datasets	FANTOM5|EPD|DRA000914|ENCODE|PRJNA4843412|DRA013844 |PRJDB5282|PRJNA548673|PRJNA401781|PRJNA615891
Protocol	CAGE|TSS_database|NETCAGE|C1CAGE|ReCappable-seq|RAMPAGE |oligo_capping|SLIC_CAGE|TIF-seq2
TSS cluster detected*	14

  * The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

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Description:	PLS,CTCF-bound (EH38D3554505,EH38E2284366)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENST00000237380.12:0 ENST00000506409.1:0 AF318059:0 AK313928:0 AF358829:0 BC011936:0 AF317680:0 GeneID: 80306 HGNC/MGI_ID: HGNC:24628 UniProt_ID: Q9H204 Nearer transcript ids and distances: DQ893391:2 DQ896713:2 KJ894808:2 AF317679:6 ENST00000503945.2:12 AF317678:12 view more...

Gene_name: mediator complex subunit 28 Gene_symbol: MED28 Gene_synonyms: DKFZP434N185 EG1 magicin Gene_source: HGNC:24628

TATA-Box annotation

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Distance to TSS:	-3
Nearest PromoterID:	NM_025205
Entrez ID:	80306
Nearest Unigene:	Hs.731966
Nearest Refseq:	NM_025205
Nearest Ensembl:	ENSG00000118579
Gene Name:	mediator complex subunit 28
Gene Alias:	1500003D12Rik|EG1|magicin
Gene Type:	protein-coding
CpG%:	0.037037
GC%:	0.535714
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.