rfhg_56721.1
Basic information about the TSS
|
| |||||||||||||
| Source datasets | FANTOM5|DBTSS | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Protocol | CAGE|TSS-seq | |||||||||||||
| TSS cluster detected* | 2 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
| Description: | PLS,CTCF-bound (EH38D3560758,EH38E2287825) |
|---|---|
| Category: | PLS |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
|
|
TATA-Box annotation
| Distance to TSS: | -46 |
|---|---|
| Nearest PromoterID: | NM_015874 |
| Entrez ID: | 3516 |
| Nearest Unigene: | Hs.479396 |
| Nearest Refseq: | NM_005349 |
| Nearest Ensembl: | ENSG00000168214 |
| Gene Name: | |
| Gene Alias: | AOS3|CBF1|IGKJRB|IGKJRB1|KBF2|RBP-J|RBPJK|RBPSUH|SUH|csl |
| Gene Type: | protein-coding |
| CpG%: | 0.052632 |
| GC%: | 0.650000 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
Property "Nearest transcripts" (as page type) with input value "AK311419:-14 ENST00000514807.5:16 ENST00000514380.5:-27 AK303244:-27 ENST00000348160.9:36 L07872:-73 ENST00000361572.10:-189 L07874:-189 ENST00000681506.1:190 ENST00000509158.6:204 ENST00000681856.1:232 ENST00000513182.5:236 ENST00000680210.1:240 ENST00000681679.1:240 ENST00000681025.1:240 ENST00000511401.5:243 ENST00000680140.1:243 ENST00000355476.8:243 NM_015874.6:243 NM_203284.3:243 ENST00000680511.1:244 ENST00000510778.7:245 AK302230:246 ENST00000679698.1:251 BC053568:257 BC064976:261 ENST00000679469.1:457 NM_001374402.1:457 NM_001363577.2:457" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.