rfhg_57675.1

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Basic information about the TSS


TSS ID:rfhg_57675.1
TSS ID(Version3):hg_47607.1
Species:human
Chr:chr4
Start:51843119
End:51843204
Strand:+
Source datasetsFANTOM5|EPD|DRA000914|ENCODE|PRJNA615891|PRJNA401781
|PRJNA548673|PRJNA4843412|DRA013844|PRJDB5282
ProtocolCAGE|TSS_database|SLIC_CAGE|RAMPAGE|oligo_capping
|ReCappable-seq|TIF-seq2|NETCAGE|C1CAGE
TSS cluster detected*14

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:-
Category:-

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000504113.5:0
ENST00000502930.5:0
ENST00000513800.5:0
ENST00000507741.5:0
ENST00000334635.10:0
ENST00000477560.5:0
BC053897:0
AK294896:0
BX537944:0
AK027051:0
D87466:0
BC041702:0
GeneID:23142
HGNC/MGI_ID:HGNC:28998
UniProt_ID:B4DH26 D6RB33 D6RCB7 D6RIY3 Q92564
Nearer transcript ids and distances:
  • ENST00000506673.5:-16
  • DQ585000:30
  • AM392554:39
  • AM392637:39
  • AM392729:39
  • AM393240:39
  • AB383832:39
  • ENST00000381441.7:-56
  • ENST00000511675.5:-58
  • ENST00000509376.5:-119
  • AK124346:-119
  • ENST00000509068.5:337
  • ENST00000505403.5:375
  • ENST00000451288.6:375
  • NM_001287755.1:375
  • AK294894:375
view more...
Gene_name:defective in cullin neddylation 1 domain containing 4
Gene_symbol:DCUN1D4
Gene_synonyms:KIAA0276
Gene_source:HGNC:28998



TATA-Box annotation


Distance to TSS:8
Nearest PromoterID:NM_001040402
Entrez ID:23142
Nearest Unigene:Hs.605388
Nearest Refseq:NM_015115
Nearest Ensembl:ENSG00000109184
Gene Name:defective in cullin neddylation 1 domain containing 4
Gene Alias:-
Gene Type:protein-coding
CpG%:0.129412
GC%:0.767442
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.


















Property "Nearest transcripts" (as page type) with input value "ENST00000506673.5:-16 DQ585000:30 AM392554:39 AM392637:39 AM392729:39 AM393240:39 AB383832:39 ENST00000381441.7:-56 ENST00000511675.5:-58 ENST00000509376.5:-119 AK124346:-119 ENST00000509068.5:337 ENST00000505403.5:375 ENST00000451288.6:375 NM_001287755.1:375 AK294894:375" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.