rfhg_57675.1
Basic information about the TSS
|
| |||||||||||||||
Source datasets | FANTOM5|EPD|DRA000914|ENCODE|PRJNA615891|PRJNA401781 |PRJNA548673|PRJNA4843412|DRA013844|PRJDB5282 | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Protocol | CAGE|TSS_database|SLIC_CAGE|RAMPAGE|oligo_capping |ReCappable-seq|TIF-seq2|NETCAGE|C1CAGE | |||||||||||||||
TSS cluster detected* | 14 |
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
Description: | - |
---|---|
Category: | - |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
|
|
TATA-Box annotation
Distance to TSS: | 8 |
---|---|
Nearest PromoterID: | NM_001040402 |
Entrez ID: | 23142 |
Nearest Unigene: | Hs.605388 |
Nearest Refseq: | NM_015115 |
Nearest Ensembl: | ENSG00000109184 |
Gene Name: | defective in cullin neddylation 1 domain containing 4 |
Gene Alias: | - |
Gene Type: | protein-coding |
CpG%: | 0.129412 |
GC%: | 0.767442 |
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
TSS expression
Property "Nearest transcripts" (as page type) with input value "ENST00000506673.5:-16 DQ585000:30 AM392554:39 AM392637:39 AM392729:39 AM393240:39 AB383832:39 ENST00000381441.7:-56 ENST00000511675.5:-58 ENST00000509376.5:-119 AK124346:-119 ENST00000509068.5:337 ENST00000505403.5:375 ENST00000451288.6:375 NM_001287755.1:375 AK294894:375" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.