rfhg_61345.1

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Basic information about the TSS


TSS ID:rfhg_61345.1
TSS ID(Version3):hg_49288.1
Species:human
Chr:chr4
Start:112232259
End:112232281
Strand:+
Source datasetsFANTOM5|PRJDB5282
ProtocolCAGE|C1CAGE
TSS cluster detected*2

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:pELS,CTCF-bound (EH38D3615640,EH38E2320565)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:AB463522:-167
AM392774:-167
AM393154:-167
AM393708:-167
EU831743:-167
AM393046:-167
AM393604:-167
EU831660:-167
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • KJ899139:-169
  • ENST00000506522.1:-370
  • AK315299:-420
  • ENST00000309703.10:-426
  • BC009485:-426
  • ENST00000502954.1:-434
  • AL136628:-434
  • ENST00000274000.10:-472
  • NM_001128426.3:-472
  • NM_018569.6:-472
  • NR_136622.2:-472
  • BX647702:-472
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:483
Nearest PromoterID:NM_001128426
Entrez ID:55435
Nearest Unigene:Hs.435991
Nearest Refseq:NM_018569
Nearest Ensembl:ENSG00000138660
Gene Name:
Gene Alias:2C18|C4orf16|GBAR|PRO0971|gamma-BAR
Gene Type:protein-coding
CpG%:0.090909
GC%:0.739130
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):