rfhg_63224.1

Basic information about the TSS

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TSS ID: rfhg_63224.1 TSS ID(Version3): hg_54453.1 Species: human Chr: chr4		Start: 154550374 End: 154550440 Strand: -
Source datasets	FANTOM5|EPD|DBTSS|DRA000914|ENCODE|PRJNA597322|PRJDB5282 |PRJNA401781|PRJNA4843412|PRJNA615891|DRA013844|PRJNA548673
Protocol	CAGE|TSS_database|TSS-seq|STRIPE-seq|C1CAGE|RAMPAGE|NETCAGE |SLIC_CAGE|oligo_capping|ReCappable-seq|TIF-seq2
TSS cluster detected*	16

  * The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

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Description:	PLS,CTCF-bound (EH38D3644553,EH38E2337820)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENST00000499023.7:0 ENST00000302078.9:0 ENST00000506192.5:0 ENST00000512719.5:0 ENST00000509975.5:0 ENST00000503751.5:0 ENST00000515520.1:0 BC036046:0 BC020786:0 AK002108:0 AK307997:0 AK304574:0 GeneID: 5356 HGNC/MGI_ID: HGNC:9089 UniProt_ID: B7Z982 D6RE04 O43660 Nearer transcript ids and distances: BC106004:3 LF351985:202 MA587562:202 view more...

Gene_name: pleiotropic regulator 1 Gene_symbol: PLRG1 Gene_synonyms: Cwc1 PRL1 PRPF46 Prp46 TANGO4 Gene_source: HGNC:9089

TATA-Box annotation

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Distance to TSS:	-7
Nearest PromoterID:	NM_002669
Entrez ID:	5356
Nearest Unigene:	Hs.249996
Nearest Refseq:	NM_002669
Nearest Ensembl:	ENSG00000171566
Gene Name:	pleiotropic regulator 1
Gene Alias:	Cwc1|PRL1|PRP46|PRPF46|TANGO4
Gene Type:	protein-coding
CpG%:	0.090909
GC%:	0.656716
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.