rfhg_65299.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_65299.1
Species:human
Chr:chr5
Start:271476
End:271503
Strand:-
Source datasetsPRJNA401781
ProtocolCAGE|oligo_capping
TSS cluster detected*2

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D3668587,EH38E2351842)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000512642.1:-13
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • NR_104613.1:-21
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:35
Nearest PromoterID:NR_104613
Entrez ID:102467073
Nearest Unigene:Hs.368328
Nearest Refseq:NR_104613
Nearest Ensembl:
Gene Name:
Gene Alias:-
Gene Type:ncRNA
CpG%:0.037037
GC%:0.714286
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):