rfhg_65918.1

Basic information about the TSS

TSS ID:	rfhg_65918.1
Species:	human
Chr:	chr5

Start:	12574833
End:	12574861
Strand:	+

Source datasets

PRJNA401781|PRJNA615891

Protocol

RAMPAGE|SLIC_CAGE|CAGE|oligo_capping

TSS cluster detected^*

4

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	PLS (EH38D3678507,EH38E2357613)
Category:	PLS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	ENST00000664069.1:0 ENST00000505877.5:0 ENST00000505196.1:0 AY328030:0 AY328031:0 AY328032:0 AY328033:0 AY330599:0
GeneID:	404663
HGNC/MGI_ID:	HGNC:37171
UniProt_ID:
Nearer transcript ids and distances:	ENST00000513051.6:-3

Gene_name:	long intergenic non-protein coding RNA 1194
Gene_symbol:	LINC01194
Gene_synonyms:	TAG
Gene_source:	HGNC:37171

TATA-Box annotation

Distance to TSS:	-10
Nearest PromoterID:	NR_033383
Entrez ID:	404663
Nearest Unigene:	Hs.552273
Nearest Refseq:	NR_033383
Nearest Ensembl:
Gene Name:	long intergenic non-protein coding RNA 1194
Gene Alias:	CT49\|TAG
Gene Type:	ncRNA
CpG%:	0.071429
GC%:	0.724138
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.