rfhg_66430.1

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Basic information about the TSS


TSS ID:rfhg_66430.1
Species:human
Chr:chr5
Start:31532390
End:31532415
Strand:+
Source datasetsPRJNA4843412
ProtocolNETCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:-
Category:-

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:AB527598:0
GeneID:55322
HGNC/MGI_ID:HGNC:25639
UniProt_ID:
Nearer transcript ids and distances:
  • BC021215:-61
  • ENST00000504464.5:-74
  • ENST00000325366.14:-89
  • NM_018356.3:-89
  • NR_134298.2:-89
  • ENST00000511208.2:-91
  • ENST00000515409.5:-95
  • ENST00000507818.6:-95
  • ENST00000517780.1:-95
  • AK002055:-98
  • ENST00000513967.5:-101
  • AK299156:-101
  • ENST00000510659.5:-103
  • BC032845:-103
view more...
Gene_name:chromosome 5 open reading frame 22
Gene_symbol:C5orf22
Gene_synonyms:FLJ11193
Gene_source:HGNC:25639



TATA-Box annotation


Distance to TSS:101
Nearest PromoterID:NM_018356
Entrez ID:55322
Nearest Unigene:Hs.519246
Nearest Refseq:NM_018356
Nearest Ensembl:ENSG00000082213
Gene Name:chromosome 5 open reading frame 22
Gene Alias:-
Gene Type:protein-coding
CpG%:0.120000
GC%:0.653846
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.


















Property "Nearest transcripts" (as page type) with input value "BC021215:-61 ENST00000504464.5:-74 ENST00000325366.14:-89 NM_018356.3:-89 NR_134298.2:-89 ENST00000511208.2:-91 ENST00000515409.5:-95 ENST00000507818.6:-95 ENST00000517780.1:-95 AK002055:-98 ENST00000513967.5:-101 AK299156:-101 ENST00000510659.5:-103 BC032845:-103" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.