rfhg_66431.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_66431.1
Species:human
Chr:chr5
Start:31538159
End:31538169
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:dELS (EH38D3689346,EH38E2363146)
Category:dELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000510530.1:4
GeneID:55322
HGNC/MGI_ID:HGNC:25639
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:chromosome 5 open reading frame 22
    Gene_symbol:C5orf22
    Gene_synonyms:FLJ11193
    Gene_source:HGNC:25639



    TATA-Box annotation


    Distance to TSS:5863
    Nearest PromoterID:NM_018356
    Entrez ID:55322
    Nearest Unigene:Hs.519246
    Nearest Refseq:NM_018356
    Nearest Ensembl:ENSG00000082213
    Gene Name:chromosome 5 open reading frame 22
    Gene Alias:-
    Gene Type:protein-coding
    CpG%:0.000000
    GC%:0.181818
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.